|
|
@@ -1,6 +1,6 @@
|
|
|
<template>
|
|
|
<div class="app-container">
|
|
|
- <el-form :model="queryParams" ref="queryForm" size="small" :inline="true" v-show="showSearch" label-width="68px">
|
|
|
+ <el-form :model="queryParams" ref="queryForm" size="small" :inline="true" v-show="showSearch" label-width="140px">
|
|
|
<el-form-item label="唯一注册号" prop="assemblyAccession">
|
|
|
<el-input
|
|
|
v-model="queryParams.assemblyAccession"
|
|
|
@@ -9,30 +9,6 @@
|
|
|
@keyup.enter.native="handleQuery"
|
|
|
/>
|
|
|
</el-form-item>
|
|
|
- <!-- <el-form-item label="参考基因组类型" prop="refseqCategory">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.refseqCategory"
|
|
|
- placeholder="请输入参考基因组类型"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item> -->
|
|
|
- <el-form-item label="分类号" prop="taxid">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.taxid"
|
|
|
- placeholder="请输入分类号"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="种分类号" prop="speciesTaxid">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.speciesTaxid"
|
|
|
- placeholder="请输入种分类号"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
<el-form-item label="生物名称" prop="organismName">
|
|
|
<el-input
|
|
|
v-model="queryParams.organismName"
|
|
|
@@ -41,86 +17,6 @@
|
|
|
@keyup.enter.native="handleQuery"
|
|
|
/>
|
|
|
</el-form-item>
|
|
|
- <!-- <el-form-item label="亚种名称" prop="infraspecificName">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.infraspecificName"
|
|
|
- placeholder="请输入亚种名称"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item> -->
|
|
|
- <!-- <el-form-item label="分类类型" prop="isolate">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.isolate"
|
|
|
- placeholder="请输入分类类型"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="拼装级别" prop="assemblyLevel">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.assemblyLevel"
|
|
|
- placeholder="请输入拼装级别"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="基因组级别" prop="genomeRep">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.genomeRep"
|
|
|
- placeholder="请输入基因组级别"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="seq_rel_date" prop="seqRelDate">
|
|
|
- <el-date-picker clearable
|
|
|
- v-model="queryParams.seqRelDate"
|
|
|
- type="date"
|
|
|
- value-format="yyyy-MM-dd"
|
|
|
- placeholder="请选择seq_rel_date">
|
|
|
- </el-date-picker>
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="ASM编号" prop="asmName">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.asmName"
|
|
|
- placeholder="请输入ASM编号"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="gbrs_paired_asm" prop="gbrsPairedAsm">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.gbrsPairedAsm"
|
|
|
- placeholder="请输入gbrs_paired_asm"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="paired_asm_comp" prop="pairedAsmComp">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.pairedAsmComp"
|
|
|
- placeholder="请输入paired_asm_comp"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item> -->
|
|
|
- <el-form-item label="来源地址" prop="ftpPath">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.ftpPath"
|
|
|
- placeholder="请输入来源地址"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <!-- <el-form-item label="excluded_from_refseq" prop="excludedFromRefseq">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.excludedFromRefseq"
|
|
|
- placeholder="请输入excluded_from_refseq"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
<el-form-item label="病源类型" prop="group">
|
|
|
<el-input
|
|
|
v-model="queryParams.group"
|
|
|
@@ -129,158 +25,46 @@
|
|
|
@keyup.enter.native="handleQuery"
|
|
|
/>
|
|
|
</el-form-item>
|
|
|
- <el-form-item label="基因组大小" prop="genomeSize">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.genomeSize"
|
|
|
- placeholder="请输入基因组大小"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="基因组大小" prop="genomeSizeUngapped">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.genomeSizeUngapped"
|
|
|
- placeholder="请输入基因组大小"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="GC比例" prop="gcPercent">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.gcPercent"
|
|
|
- placeholder="请输入GC比例"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="replicon_count" prop="repliconCount">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.repliconCount"
|
|
|
- placeholder="请输入replicon_count"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="scaffold_count" prop="scaffoldCount">
|
|
|
+ <el-form-item label="子类标签" prop="group1">
|
|
|
<el-input
|
|
|
- v-model="queryParams.scaffoldCount"
|
|
|
- placeholder="请输入scaffold_count"
|
|
|
+ v-model="queryParams.group1"
|
|
|
+ placeholder="请输入子类标签"
|
|
|
clearable
|
|
|
@keyup.enter.native="handleQuery"
|
|
|
/>
|
|
|
</el-form-item>
|
|
|
- <el-form-item label="contig_count" prop="contigCount">
|
|
|
+ <el-form-item label="中文解释" prop="defined">
|
|
|
<el-input
|
|
|
- v-model="queryParams.contigCount"
|
|
|
- placeholder="请输入contig_count"
|
|
|
+ v-model="queryParams.defined"
|
|
|
+ placeholder="请输入中文解释"
|
|
|
clearable
|
|
|
@keyup.enter.native="handleQuery"
|
|
|
/>
|
|
|
</el-form-item>
|
|
|
- <el-form-item label="总基因数" prop="totalGeneCount">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.totalGeneCount"
|
|
|
- placeholder="请输入总基因数"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="翻译蛋白基因数" prop="proteinCodingGeneCount">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.proteinCodingGeneCount"
|
|
|
- placeholder="请输入翻译蛋白基因数"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="非编码基因数" prop="nonCodingGeneCount">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.nonCodingGeneCount"
|
|
|
- placeholder="请输入非编码基因数"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item> -->
|
|
|
- <el-form-item label="中文名" prop="nameCn">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.nameCn"
|
|
|
- placeholder="请输入中文名"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="序列来源" prop="seqSource">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.seqSource"
|
|
|
- placeholder="请输入序列来源"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="解释来源" prop="express">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.express"
|
|
|
- placeholder="请输入解释来源"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <!-- <el-form-item label="文件路径" prop="filePath">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.filePath"
|
|
|
- placeholder="请输入文件路径"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="点突变耐药基因" prop="dtpnyjy">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.dtpnyjy"
|
|
|
- placeholder="请输入点突变耐药基因"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="点突变耐药基因说明" prop="dtpnyjyExpress">
|
|
|
+ <el-form-item label="毒力基因" prop="dljy">
|
|
|
<el-input
|
|
|
- v-model="queryParams.dtpnyjyExpress"
|
|
|
- placeholder="请输入点突变耐药基因说明"
|
|
|
+ v-model="queryParams.dljy"
|
|
|
+ placeholder="请输入毒力基因"
|
|
|
clearable
|
|
|
@keyup.enter.native="handleQuery"
|
|
|
/>
|
|
|
</el-form-item>
|
|
|
- <el-form-item label="耐药基因" prop="nyjy">
|
|
|
+ <el-form-item label="毒力基因解释" prop="dljyExpress">
|
|
|
<el-input
|
|
|
- v-model="queryParams.nyjy"
|
|
|
- placeholder="请输入耐药基因"
|
|
|
+ v-model="queryParams.dljyExpress"
|
|
|
+ placeholder="请输入毒力基因解释"
|
|
|
clearable
|
|
|
@keyup.enter.native="handleQuery"
|
|
|
/>
|
|
|
</el-form-item>
|
|
|
- <el-form-item label="耐药基因说明" prop="nyjyExpress">
|
|
|
+ <el-form-item label="毒力基因解释来源" prop="dljySource">
|
|
|
<el-input
|
|
|
- v-model="queryParams.nyjyExpress"
|
|
|
- placeholder="请输入耐药基因说明"
|
|
|
+ v-model="queryParams.dljySource"
|
|
|
+ placeholder="请输入毒力基因解释来源"
|
|
|
clearable
|
|
|
@keyup.enter.native="handleQuery"
|
|
|
/>
|
|
|
</el-form-item>
|
|
|
- <el-form-item label="毒力基因" prop="dljy">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.dljy"
|
|
|
- placeholder="请输入毒力基因"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="毒力基因说明" prop="dljyExpress">
|
|
|
- <el-input
|
|
|
- v-model="queryParams.dljyExpress"
|
|
|
- placeholder="请输入毒力基因说明"
|
|
|
- clearable
|
|
|
- @keyup.enter.native="handleQuery"
|
|
|
- />
|
|
|
- </el-form-item> -->
|
|
|
<el-form-item>
|
|
|
<el-button type="primary" icon="el-icon-search" size="mini" @click="handleQuery">搜索</el-button>
|
|
|
<el-button icon="el-icon-refresh" size="mini" @click="resetQuery">重置</el-button>
|
|
|
@@ -288,16 +72,6 @@
|
|
|
</el-form>
|
|
|
|
|
|
<el-row :gutter="10" class="mb8">
|
|
|
- <el-col :span="1.5">
|
|
|
- <el-button
|
|
|
- type="danger"
|
|
|
- plain
|
|
|
- icon="el-icon-delete"
|
|
|
- size="mini"
|
|
|
- :disabled="multiple"
|
|
|
- @click="handleDelete"
|
|
|
- >删除</el-button>
|
|
|
- </el-col>
|
|
|
<el-col :span="1.5">
|
|
|
<el-button
|
|
|
type="warning"
|
|
|
@@ -305,61 +79,61 @@
|
|
|
icon="el-icon-upload"
|
|
|
size="mini"
|
|
|
@click="$refs.upload_file.click()"
|
|
|
- >导入</el-button>
|
|
|
- </el-col>
|
|
|
- <right-toolbar :showSearch.sync="showSearch" @queryTable="getList"></right-toolbar>
|
|
|
- </el-row>
|
|
|
+ >导入</el-button>
|
|
|
+ </el-col>
|
|
|
+ <right-toolbar :showSearch.sync="showSearch" @queryTable="getList"></right-toolbar>
|
|
|
+ </el-row>
|
|
|
|
|
|
- <el-table v-loading="loading" :data="dataBaseList" @selection-change="handleSelectionChange">
|
|
|
- <el-table-column type="selection" width="55" align="center" />
|
|
|
- <el-table-column label="唯一注册号" align="center" prop="assemblyAccession" />
|
|
|
- <el-table-column label="参考基因组类型" align="center" prop="refseqCategory" />
|
|
|
+ <el-table v-loading="loading" :data="dataBaseList" >
|
|
|
+ <el-table-column label="唯一注册号" align="center" prop="assemblyAccession" width="100" />
|
|
|
+ <el-table-column label="生物名称" align="center" prop="organismName" width="150"/>
|
|
|
+ <el-table-column label="病源类型" align="center" prop="group" />
|
|
|
+ <el-table-column label="子类标签" align="center" prop="group1" />
|
|
|
+ <el-table-column label="中文解释" align="center" prop="defined" width="500" />
|
|
|
+ <el-table-column label="解释的来源" align="center" prop="definedSource" width="200" />
|
|
|
+ <el-table-column label="毒力基因" align="center" prop="dljy" />
|
|
|
+ <el-table-column label="毒力基因解释" align="center" prop="dljyExpress" width="100" />
|
|
|
+ <el-table-column label="毒力基因解释来源" align="center" prop="dljySource" width="200" />
|
|
|
+ <!-- <el-table-column label="参考基因组类型" align="center" prop="refseqCategory" />
|
|
|
<el-table-column label="分类号" align="center" prop="taxid" />
|
|
|
<el-table-column label="种分类号" align="center" prop="speciesTaxid" />
|
|
|
- <el-table-column label="生物名称" align="center" prop="organismName" />
|
|
|
- <el-table-column label="亚种名称" align="center" prop="infraspecificName" />
|
|
|
+ <el-table-column label="亚种名称" align="center" prop="infraspecificName"/>
|
|
|
<el-table-column label="分类类型" align="center" prop="isolate" />
|
|
|
<el-table-column label="拼装级别" align="center" prop="assemblyLevel" />
|
|
|
<el-table-column label="基因组级别" align="center" prop="genomeRep" />
|
|
|
- <!-- <el-table-column label="seq_rel_date" align="center" prop="seqRelDate" width="180">
|
|
|
- <template slot-scope="scope">
|
|
|
- <span>{{ parseTime(scope.row.seqRelDate, '{y}-{m}-{d}') }}</span>
|
|
|
- </template>
|
|
|
- </el-table-column>
|
|
|
+ <el-table-column label="seqRelDate" align="center" prop="seqRelDate" />
|
|
|
<el-table-column label="ASM编号" align="center" prop="asmName" />
|
|
|
<el-table-column label="gbrs_paired_asm" align="center" prop="gbrsPairedAsm" />
|
|
|
- <el-table-column label="paired_asm_comp" align="center" prop="pairedAsmComp" /> -->
|
|
|
- <el-table-column label="来源地址" align="center" prop="ftpPath" width="200"/>
|
|
|
- <!-- <el-table-column label="excluded_from_refseq" align="center" prop="excludedFromRefseq" /> -->
|
|
|
+ <el-table-column label="paired_asm_comp" align="center" prop="pairedAsmComp" />
|
|
|
+ <el-table-column label="ftp_path" align="center" prop="ftpPath" />
|
|
|
+ <el-table-column label="excluded_from_refseq" align="center" prop="excludedFromRefseq" />
|
|
|
<el-table-column label="装配类型" align="center" prop="assemblyType" />
|
|
|
- <el-table-column label="病源类型" align="center" prop="group" />
|
|
|
<el-table-column label="基因组大小" align="center" prop="genomeSize" />
|
|
|
- <el-table-column label="基因组大小" align="center" prop="genomeSizeUngapped" />
|
|
|
- <!-- <el-table-column label="GC比例" align="center" prop="gcPercent" />
|
|
|
+ <el-table-column label="基因组大小(无缺口)" align="center" prop="genomeSizeUngapped" />
|
|
|
+ <el-table-column label="GC比例" align="center" prop="gcPercent" />
|
|
|
<el-table-column label="replicon_count" align="center" prop="repliconCount" />
|
|
|
<el-table-column label="scaffold_count" align="center" prop="scaffoldCount" />
|
|
|
- <el-table-column label="contig_count" align="center" prop="contigCount" /> -->
|
|
|
+ <el-table-column label="contig_count" align="center" prop="contigCount" />
|
|
|
<el-table-column label="总基因数" align="center" prop="totalGeneCount" />
|
|
|
- <el-table-column label="翻译蛋白基因数" align="center" prop="proteinCodingGeneCount" />
|
|
|
- <el-table-column label="非编码基因数" align="center" prop="nonCodingGeneCount" />
|
|
|
- <el-table-column label="中文名" align="center" prop="nameCn" />
|
|
|
- <!-- <el-table-column label="定义" align="center" prop="defined" /> -->
|
|
|
- <el-table-column label="序列来源" align="center" prop="seqSource" />
|
|
|
- <el-table-column label="解释来源" align="center" prop="express" />
|
|
|
- <el-table-column label="文件路径" align="center" prop="filePath" />
|
|
|
- <el-table-column label="点突变耐药基因" align="center" prop="dtpnyjy" />
|
|
|
- <el-table-column label="点突变耐药基因说明" align="center" prop="dtpnyjyExpress" />
|
|
|
- <el-table-column label="耐药基因" align="center" prop="nyjy" />
|
|
|
- <el-table-column label="耐药基因说明" align="center" prop="nyjyExpress" />
|
|
|
- <el-table-column label="毒力基因" align="center" prop="dljy" />
|
|
|
- <el-table-column label="毒力基因说明" align="center" prop="dljyExpress" />
|
|
|
- <el-table-column label="备注" align="center" prop="remark" />
|
|
|
+ <el-table-column label="翻译蛋白基因数" align="center" prop="proteinCodingGeneCount" />
|
|
|
+ <el-table-column label="非编码基因数" align="center" prop="nonCodingGeneCount" />
|
|
|
+ <el-table-column label="耐药基因" align="center" prop="nyjy" />
|
|
|
+ <el-table-column label="耐药基因解释" align="center" prop="nyjyExpress" />
|
|
|
+ <el-table-column label="耐药基因解释来源" align="center" prop="nyjySource" />
|
|
|
+ <el-table-column label="点突变" align="center" prop="dtpnyjy" />
|
|
|
+ <el-table-column label="点突变解释" align="center" prop="dtpnyjyExpress" />
|
|
|
+ <el-table-column label="点突变解释来源" align="center" prop="dtpnyjySource" /> -->
|
|
|
<el-table-column label="操作" align="center" class-name="small-padding fixed-width" fixed="right">
|
|
|
<template slot-scope="scope">
|
|
|
<el-button
|
|
|
size="mini"
|
|
|
type="text"
|
|
|
- icon="el-icon-delete"
|
|
|
+ @click="handleUpdate(scope.row)"
|
|
|
+ v-hasPermi="['data:dataReportByt:edit']"
|
|
|
+ >查看</el-button>
|
|
|
+ <el-button
|
|
|
+ size="mini"
|
|
|
+ type="text"
|
|
|
@click="handleDelete(scope.row)"
|
|
|
v-hasPermi="['data:dataBase:remove']"
|
|
|
>删除</el-button>
|
|
|
@@ -376,124 +150,40 @@
|
|
|
/>
|
|
|
|
|
|
<!-- 添加或修改病原体管理对话框 -->
|
|
|
- <el-dialog :title="title" :visible.sync="open" width="500px" append-to-body>
|
|
|
- <el-form ref="form" :model="form" :rules="rules" label-width="80px">
|
|
|
- <el-form-item label="唯一注册号" prop="assemblyAccession">
|
|
|
- <el-input v-model="form.assemblyAccession" placeholder="请输入唯一注册号" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="参考基因组类型" prop="refseqCategory">
|
|
|
- <el-input v-model="form.refseqCategory" placeholder="请输入参考基因组类型" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="分类号" prop="taxid">
|
|
|
- <el-input v-model="form.taxid" placeholder="请输入分类号" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="种分类号" prop="speciesTaxid">
|
|
|
- <el-input v-model="form.speciesTaxid" placeholder="请输入种分类号" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="生物名称" prop="organismName">
|
|
|
- <el-input v-model="form.organismName" placeholder="请输入生物名称" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="亚种名称" prop="infraspecificName">
|
|
|
- <el-input v-model="form.infraspecificName" placeholder="请输入亚种名称" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="分类类型" prop="isolate">
|
|
|
- <el-input v-model="form.isolate" placeholder="请输入分类类型" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="拼装级别" prop="assemblyLevel">
|
|
|
- <el-input v-model="form.assemblyLevel" placeholder="请输入拼装级别" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="基因组级别" prop="genomeRep">
|
|
|
- <el-input v-model="form.genomeRep" placeholder="请输入基因组级别" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="seq_rel_date" prop="seqRelDate">
|
|
|
- <el-date-picker clearable
|
|
|
- v-model="form.seqRelDate"
|
|
|
- type="date"
|
|
|
- value-format="yyyy-MM-dd"
|
|
|
- placeholder="请选择seq_rel_date">
|
|
|
- </el-date-picker>
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="ASM编号" prop="asmName">
|
|
|
- <el-input v-model="form.asmName" placeholder="请输入ASM编号" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="gbrs_paired_asm" prop="gbrsPairedAsm">
|
|
|
- <el-input v-model="form.gbrsPairedAsm" placeholder="请输入gbrs_paired_asm" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="paired_asm_comp" prop="pairedAsmComp">
|
|
|
- <el-input v-model="form.pairedAsmComp" placeholder="请输入paired_asm_comp" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="来源地址" prop="ftpPath">
|
|
|
- <el-input v-model="form.ftpPath" placeholder="请输入来源地址" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="excluded_from_refseq" prop="excludedFromRefseq">
|
|
|
- <el-input v-model="form.excludedFromRefseq" placeholder="请输入excluded_from_refseq" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="病源类型" prop="group">
|
|
|
- <el-input v-model="form.group" placeholder="请输入病源类型" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="基因组大小" prop="genomeSize">
|
|
|
- <el-input v-model="form.genomeSize" placeholder="请输入基因组大小" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="基因组大小" prop="genomeSizeUngapped">
|
|
|
- <el-input v-model="form.genomeSizeUngapped" placeholder="请输入基因组大小" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="GC比例" prop="gcPercent">
|
|
|
- <el-input v-model="form.gcPercent" placeholder="请输入GC比例" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="replicon_count" prop="repliconCount">
|
|
|
- <el-input v-model="form.repliconCount" placeholder="请输入replicon_count" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="scaffold_count" prop="scaffoldCount">
|
|
|
- <el-input v-model="form.scaffoldCount" placeholder="请输入scaffold_count" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="contig_count" prop="contigCount">
|
|
|
- <el-input v-model="form.contigCount" placeholder="请输入contig_count" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="总基因数" prop="totalGeneCount">
|
|
|
- <el-input v-model="form.totalGeneCount" placeholder="请输入总基因数" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="翻译蛋白基因数" prop="proteinCodingGeneCount">
|
|
|
- <el-input v-model="form.proteinCodingGeneCount" placeholder="请输入翻译蛋白基因数" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="非编码基因数" prop="nonCodingGeneCount">
|
|
|
- <el-input v-model="form.nonCodingGeneCount" placeholder="请输入非编码基因数" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="中文名" prop="nameCn">
|
|
|
- <el-input v-model="form.nameCn" placeholder="请输入中文名" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="定义" prop="defined">
|
|
|
- <el-input v-model="form.defined" type="textarea" placeholder="请输入内容" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="序列来源" prop="seqSource">
|
|
|
- <el-input v-model="form.seqSource" placeholder="请输入序列来源" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="解释来源" prop="express">
|
|
|
- <el-input v-model="form.express" placeholder="请输入解释来源" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="文件路径" prop="filePath">
|
|
|
- <el-input v-model="form.filePath" placeholder="请输入文件路径" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="点突变耐药基因" prop="dtpnyjy">
|
|
|
- <el-input v-model="form.dtpnyjy" placeholder="请输入点突变耐药基因" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="点突变耐药基因说明" prop="dtpnyjyExpress">
|
|
|
- <el-input v-model="form.dtpnyjyExpress" placeholder="请输入点突变耐药基因说明" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="耐药基因" prop="nyjy">
|
|
|
- <el-input v-model="form.nyjy" placeholder="请输入耐药基因" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="耐药基因说明" prop="nyjyExpress">
|
|
|
- <el-input v-model="form.nyjyExpress" placeholder="请输入耐药基因说明" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="毒力基因" prop="dljy">
|
|
|
- <el-input v-model="form.dljy" placeholder="请输入毒力基因" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="毒力基因说明" prop="dljyExpress">
|
|
|
- <el-input v-model="form.dljyExpress" placeholder="请输入毒力基因说明" />
|
|
|
- </el-form-item>
|
|
|
- <el-form-item label="备注" prop="remark">
|
|
|
- <el-input v-model="form.remark" type="textarea" placeholder="请输入内容" />
|
|
|
- </el-form-item>
|
|
|
+ <el-dialog :title="title" :visible.sync="open" width="800px" append-to-body>
|
|
|
+ <el-form ref="form" :model="form" :rules="rules" label-width="140px">
|
|
|
+ <el-form-item label="唯一注册号">{{ form.assemblyAccession }}</el-form-item>
|
|
|
+ <el-form-item label="生物名称">{{ form.organismName }}</el-form-item>
|
|
|
+ <el-form-item label="病源类型">{{ form.group }}</el-form-item>
|
|
|
+ <el-form-item label="子类标签">{{ form.group1 }}</el-form-item>
|
|
|
+ <el-form-item label="中文解释">{{ form.defined }}</el-form-item>
|
|
|
+ <el-form-item label="解释的来源">{{ form.definedSource }}</el-form-item>
|
|
|
+ <el-form-item label="参考基因组类型">{{ form.refseqCategory }}</el-form-item>
|
|
|
+ <el-form-item label="分类号">{{ form.taxid }}</el-form-item>
|
|
|
+ <el-form-item label="种分类号">{{ form.speciesTaxid }}</el-form-item>
|
|
|
+ <el-form-item label="亚种名称">{{ form.infraspecificName }}</el-form-item>
|
|
|
+ <el-form-item label="分类类型">{{ form.isolate }}</el-form-item>
|
|
|
+ <el-form-item label="拼装级别">{{ form.assemblyLevel }}</el-form-item>
|
|
|
+ <el-form-item label="基因组级别">{{ form.genomeRep }}</el-form-item>
|
|
|
+ <el-form-item label="seq_rel_date">{{ form.seqRelDate }}</el-form-item>
|
|
|
+ <el-form-item label="ASM编号">{{ form.asmName }}</el-form-item>
|
|
|
+ <el-form-item label="gbrs_paired_asm">{{ form.gbrs_paired_asm }}</el-form-item>
|
|
|
+ <el-form-item label="paired_asm_comp">{{ form.paired_asm_comp }}</el-form-item>
|
|
|
+ <el-form-item label="ftp_path">{{ form.ftp_path }}</el-form-item>
|
|
|
+ <el-form-item label="excluded_from_refseq">{{ form.excluded_from_refseq }}</el-form-item>
|
|
|
+ <el-form-item label="装配类型">{{ form.assemblyType }}</el-form-item>
|
|
|
+ <el-form-item label="基因组大小">{{ form.genomeSize }}</el-form-item>
|
|
|
+ <el-form-item label="基因组大小(无缺口)">{{ form.genomeSizeUngapped }}</el-form-item>
|
|
|
+ <el-form-item label="GC比例">{{ form.gcPercent }}</el-form-item>
|
|
|
+ <el-form-item label="replicon_count">{{ form.replicon_count }}</el-form-item>
|
|
|
+ <el-form-item label="scaffold_count">{{ form.scaffold_count }}</el-form-item>
|
|
|
+ <el-form-item label="contig_count">{{ form.contig_count }}</el-form-item>
|
|
|
+ <el-form-item label="总基因数">{{ form.totalGeneCount }}</el-form-item>
|
|
|
+ <el-form-item label="翻译蛋白基因数">{{ form.proteinCodingGeneCount }}</el-form-item>
|
|
|
+ <el-form-item label="非编码基因数">{{ form.nonCodingGeneCount }}</el-form-item>
|
|
|
+ <el-form-item label="毒力基因">{{ form.dljy }}</el-form-item>
|
|
|
+ <el-form-item label="毒力基因解释">{{ form.dljyExpress }}</el-form-item>
|
|
|
+ <el-form-item label="毒力基因解释来源">{{ form.dljySource }}</el-form-item>
|
|
|
</el-form>
|
|
|
<div slot="footer" class="dialog-footer">
|
|
|
<el-button @click="cancel">取 消</el-button>
|
|
|
@@ -501,11 +191,13 @@
|
|
|
</el-dialog>
|
|
|
<!-- 上传文件 -->
|
|
|
<input hidden type="file" ref="upload_file" accept=".xls,.xlsx" class="upload_file" @change="readExcel($event)" />
|
|
|
+
|
|
|
</div>
|
|
|
</template>
|
|
|
|
|
|
<script>
|
|
|
import { listDataBase, getDataBase, delDataBase, addDataBase, updateDataBase,importDataBase } from "@/api/data/dataBase"
|
|
|
+import * as XLSX from "xlsx"
|
|
|
|
|
|
export default {
|
|
|
name: "DataBase",
|
|
|
@@ -534,58 +226,33 @@ export default {
|
|
|
pageNum: 1,
|
|
|
pageSize: 10,
|
|
|
type:2,
|
|
|
- assemblyAccession: null,
|
|
|
- refseqCategory: null,
|
|
|
- taxid: null,
|
|
|
- speciesTaxid: null,
|
|
|
organismName: null,
|
|
|
- infraspecificName: null,
|
|
|
- isolate: null,
|
|
|
- assemblyLevel: null,
|
|
|
- genomeRep: null,
|
|
|
- seqRelDate: null,
|
|
|
- asmName: null,
|
|
|
- gbrsPairedAsm: null,
|
|
|
- pairedAsmComp: null,
|
|
|
- ftpPath: null,
|
|
|
- excludedFromRefseq: null,
|
|
|
- assemblyType: null,
|
|
|
group: null,
|
|
|
- genomeSize: null,
|
|
|
- genomeSizeUngapped: null,
|
|
|
- gcPercent: null,
|
|
|
- repliconCount: null,
|
|
|
- scaffoldCount: null,
|
|
|
- contigCount: null,
|
|
|
- totalGeneCount: null,
|
|
|
- proteinCodingGeneCount: null,
|
|
|
- nonCodingGeneCount: null,
|
|
|
- nameCn: null,
|
|
|
+ group1: null,
|
|
|
defined: null,
|
|
|
- seqSource: null,
|
|
|
- express: null,
|
|
|
- filePath: null,
|
|
|
- dtpnyjy: null,
|
|
|
- dtpnyjyExpress: null,
|
|
|
- nyjy: null,
|
|
|
- nyjyExpress: null,
|
|
|
- dljy: null,
|
|
|
- dljyExpress: null,
|
|
|
+ dljy:null,
|
|
|
+ dljyExpress:null,
|
|
|
+ dljySource:null,
|
|
|
},
|
|
|
// 表单参数
|
|
|
form: {},
|
|
|
// 表单校验
|
|
|
rules: {
|
|
|
- }
|
|
|
+ },
|
|
|
+ upload_file: "",
|
|
|
+ lists: [],
|
|
|
}
|
|
|
},
|
|
|
created() {
|
|
|
this.getList()
|
|
|
},
|
|
|
methods: {
|
|
|
- // 读取Excel文件
|
|
|
+ // 读取Excel文件
|
|
|
readExcel(e) {
|
|
|
+ console.log("读取Excel文件", e);
|
|
|
+ console.log("读取Excel文件11", XLSX);
|
|
|
// 读取表格文件
|
|
|
+ let that = this;
|
|
|
const files = e.target.files;
|
|
|
if (files.length <= 0) {
|
|
|
return false;
|
|
|
@@ -597,7 +264,28 @@ export default {
|
|
|
return false;
|
|
|
} else {
|
|
|
this.uploadFile(files[0]);
|
|
|
+ // 更新获取文件名
|
|
|
+ // that.upload_file = files[0].name;
|
|
|
}
|
|
|
+ // const fileReader = new FileReader();
|
|
|
+ // fileReader.onload = (ev) => {
|
|
|
+ // try {
|
|
|
+ // const data = ev.target.result;
|
|
|
+ // const workbook = XLSX.read(data, {
|
|
|
+ // type: "binary",
|
|
|
+ // });
|
|
|
+ // const wsname = workbook.SheetNames[0]; //取第一张表
|
|
|
+ // console.log(XLSX);
|
|
|
+ // console.log(wsname);
|
|
|
+ // console.log(workbook);
|
|
|
+ // const ws = XLSX.utils.sheet_to_json(workbook.Sheets[wsname]); //生成json表格内容
|
|
|
+ // that.lists = [];
|
|
|
+ // console.log(ws);
|
|
|
+ // } catch (e) {
|
|
|
+ // return false;
|
|
|
+ // }
|
|
|
+ // };
|
|
|
+ // fileReader.readAsBinaryString(files[0]);
|
|
|
},
|
|
|
uploadFile(file) {
|
|
|
console.log("上传文件", file);
|
|
|
@@ -697,6 +385,12 @@ importDataBase(formData).then(response => {
|
|
|
this.$modal.msgSuccess("删除成功")
|
|
|
}).catch(() => {})
|
|
|
},
|
|
|
+ handleUpdate(row) {
|
|
|
+ this.reset()
|
|
|
+ this.form = row
|
|
|
+ this.open = true
|
|
|
+ this.title = "查看毒力基因信息"
|
|
|
+ },
|
|
|
}
|
|
|
}
|
|
|
</script>
|
